STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS18182Uncharacterized protein. (124 aa)    
Predicted Functional Partners:
NBR_LOCUS6501
Uncharacterized protein.
   
 0.795
NBR_LOCUS15120
Uncharacterized protein.
   
 0.795
NBR_LOCUS6502
Eph LBD domain-containing protein.
   
 0.795
NBR_LOCUS8886
Uncharacterized protein.
   
 0.795
NBR_LOCUS8213
SH3 domain-containing protein.
    
 0.729
NBR_LOCUS8214
Uncharacterized protein.
    
 0.729
NBR_LOCUS3608
Uncharacterized protein.
    
 0.657
NBR_LOCUS16387
Uncharacterized protein.
    
 0.657
NBR_LOCUS19918
Protein kinase domain-containing protein.
    
 0.657
NBR_LOCUS208
Tyrosine-protein kinase Src42A (inferred by orthology to a D. melanogaster protein).
    
 0.657
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.