STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS18478Uncharacterized protein. (100 aa)    
Predicted Functional Partners:
NBR_LOCUS15675
Protein kinase domain-containing protein.
   
 0.999
NBR_LOCUS6712
14-3-3-like protein 2 (inferred by orthology to a C. elegans protein); Belongs to the 14-3-3 family.
   
 0.998
NBR_LOCUS13479
Ras protein let-60 (inferred by orthology to a C. elegans protein).
   
 0.998
NBR_LOCUS14292
Uncharacterized protein.
   
 0.994
NBR_LOCUS1726
Uncharacterized protein.
   
 0.988
NBR_LOCUS2911
Uncharacterized protein.
   
 0.988
NBR_LOCUS10257
Ras-related protein M-Ras (inferred by orthology to a human protein).
   
 0.986
NBR_LOCUS8244
KSR-1 (inferred by orthology to a C. elegans protein).
    
 0.980
NBR_LOCUS20941
TPR_REGION domain-containing protein.
   
 0.979
NBR_LOCUS6815
Ras-related protein Rap-1 (inferred by orthology to a C. elegans protein).
   
 0.978
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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