STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS19391Protein RIC1 homolog (inferred by orthology to a C. elegans protein). (1184 aa)    
Predicted Functional Partners:
NBR_LOCUS16187
Ras-related protein Rab-6.2 (inferred by orthology to a C. elegans protein).
    
 0.984
NBR_LOCUS10812
Conserved oligomeric Golgi complex subunit 8 (inferred by orthology to a C. elegans protein).
   
 0.879
NBR_LOCUS7840
ADP-ribosylation factor-related protein 1 (inferred by orthology to a human protein).
    
 0.863
NBR_LOCUS2025
Ras-related protein Rab-33 (inferred by orthology to a C. elegans protein).
    
 0.829
NBR_LOCUS16959
Ras-related protein Rab-33 (inferred by orthology to a C. elegans protein).
    
 0.829
NBR_LOCUS6570
Chrowded (inferred by orthology to a D. melanogaster protein).
    
 0.826
NBR_LOCUS7520
Uncharacterized protein.
    
 0.826
NBR_LOCUS8688
Uncharacterized protein.
    
 0.826
NBR_LOCUS17678
Putative rab15, 13, 10, 1, 35, 5, and (inferred by orthology to a S. mansoni protein).
    
 0.826
NBR_LOCUS11599
ADP-ribosylation factor-like protein 1 (inferred by orthology to a C. elegans protein); Belongs to the small GTPase superfamily. Arf family.
    
  0.783
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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