STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS19511Trafficking protein particle complex subunit 9 (inferred by orthology to a human protein). (195 aa)    
Predicted Functional Partners:
NBR_LOCUS11949
Uncharacterized protein.
   
 0.978
NBR_LOCUS13320
Uncharacterized protein.
    
 0.942
NBR_LOCUS15080
Uncharacterized protein.
    
 0.942
NBR_LOCUS3424
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.941
NBR_LOCUS3637
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.941
NBR_LOCUS15289
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
 0.896
NBR_LOCUS19146
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
 0.896
NBR_LOCUS5124
Uncharacterized protein.
   
 0.895
NBR_LOCUS17860
Uncharacterized protein.
   
 0.895
NBR_LOCUS22283
Uncharacterized protein.
   
 0.895
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
Server load: low (14%) [HD]