STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS19524CTP_transf_like domain-containing protein. (164 aa)    
Predicted Functional Partners:
NBR_LOCUS11147
Malate synthase; Belongs to the malate synthase family.
    
  0.925
NBR_LOCUS10642
Methyltransf_11 domain-containing protein.
  
 
 0.919
NBR_LOCUS157
Uncharacterized protein.
     
 0.891
NBR_LOCUS11193
Uncharacterized protein.
     
 0.891
NBR_LOCUS9511
Uncharacterized protein.
  
 
 0.885
NBR_LOCUS9512
Uncharacterized protein.
  
 
 0.885
NBR_LOCUS21071
Putative choline-phosphate cytidylyltransferase (inferred by orthology to a C. elegans protein).
  
  
 
0.875
NBR_LOCUS9863
Ethanolaminephosphotransferase 1 (inferred by orthology to a human protein); Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.869
NBR_LOCUS16552
Uncharacterized protein.
     
 0.868
NBR_LOCUS22482
Uncharacterized protein.
     
 0.868
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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