STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS19819Ryanodine receptor 44F (inferred by orthology to a D. melanogaster protein). (378 aa)    
Predicted Functional Partners:
NBR_LOCUS3272
Ryanodine receptor 44F (inferred by orthology to a D. melanogaster protein).
 
     0.951
NBR_LOCUS3897
Uncharacterized protein.
 
     0.950
NBR_LOCUS19412
Ion_trans domain-containing protein.
 
     0.948
NBR_LOCUS22466
Uncharacterized protein.
 
     0.947
NBR_LOCUS11808
Uncharacterized protein.
 
     0.938
NBR_LOCUS17717
B30.2/SPRY domain-containing protein.
 
     0.938
NBR_LOCUS17715
Uncharacterized protein.
 
     0.934
NBR_LOCUS17716
Uncharacterized protein.
 
     0.931
NBR_LOCUS5074
Uncharacterized protein.
 
     0.914
NBR_LOCUS20411
B30.2/SPRY domain-containing protein.
 
     0.900
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.