STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS20102ABC transporter domain-containing protein. (394 aa)    
Predicted Functional Partners:
NBR_LOCUS8430
ABC transporter domain-containing protein.
 
    
0.920
NBR_LOCUS3872
ABC transporter domain-containing protein.
 
    
0.916
NBR_LOCUS5588
ABC transporter domain-containing protein.
 
     0.572
NBR_LOCUS3963
Uncharacterized protein.
    
 0.555
NBR_LOCUS4636
Nuclear hormone receptor family member nhr-2 (inferred by orthology to a C. elegans protein).
    
 0.555
NBR_LOCUS17931
Uncharacterized protein.
    
 0.555
NBR_LOCUS19805
Bile acid receptor (inferred by orthology to a human protein).
    
 0.555
NBR_LOCUS21919
Uncharacterized protein.
    
 0.555
NBR_LOCUS8596
Nuclear hormone receptor family member nhr-48 (inferred by orthology to a C. elegans protein).
    
 0.555
NBR_LOCUS14658
Nuclear hormone receptor family member nhr-19 (inferred by orthology to a C. elegans protein).
    
  0.554
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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