STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS20743GCFC domain-containing protein. (874 aa)    
Predicted Functional Partners:
NBR_LOCUS6318
Septin and tuftelin-interacting protein 1 homolog (inferred by orthology to a C. elegans protein).
    
 0.911
NBR_LOCUS20024
Pre-mRNA-splicing factor syf-2 (inferred by orthology to a C. elegans protein).
    
  0.822
NBR_LOCUS2374
Uncharacterized protein.
    
 0.799
NBR_LOCUS3583
Uncharacterized protein.
    
 0.799
NBR_LOCUS3664
Uncharacterized protein.
    
 0.799
NBR_LOCUS21693
Uncharacterized protein.
    
 0.799
NBR_LOCUS22007
Uncharacterized protein.
    
 0.799
NBR_LOCUS13469
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
  0.781
NBR_LOCUS12187
Splicing factor Prp8, putative (inferred by orthology to a S. mansoni protein).
    
   0.755
NBR_LOCUS14015
Pre-mRNA-splicing factor 8 homolog (inferred by orthology to a C. elegans protein).
    
   0.755
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.