STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS21226Uncharacterized protein. (268 aa)    
Predicted Functional Partners:
NBR_LOCUS8347
ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Eukaryotic two domain clade 'E' sub-subfamily.
   
 0.769
NBR_LOCUS7871
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.755
NBR_LOCUS11765
Enolase (inferred by orthology to a C. elegans protein).
    
 0.736
NBR_LOCUS22383
Phosphoglycerate kinase.
    
 0.736
NBR_LOCUS21673
Glyceraldehyde-3-phosphate dehydrogenase (inferred by orthology to a human protein).
    
 0.693
NBR_LOCUS1627
Gp_dh_N domain-containing protein.
    
 0.693
NBR_LOCUS11260
Ribulose-phosphate 3-epimerase (inferred by orthology to a C. elegans protein).
  
 
 0.691
NBR_LOCUS709
Triosephosphate isomerase.
    
 0.685
NBR_LOCUS496
Glucose-6-phosphate 1-dehydrogenase (inferred by orthology to a C. elegans protein).
  
 
 0.683
NBR_LOCUS6819
Transket_pyr domain-containing protein.
    
 0.677
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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