STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS21277Uncharacterized protein. (128 aa)    
Predicted Functional Partners:
NBR_LOCUS46
SAP30_Sin3_bdg domain-containing protein.
   
 0.999
NBR_LOCUS463
Uncharacterized protein.
  
 0.999
NBR_LOCUS960
40S ribosomal protein S18 (inferred by orthology to a human protein).
  
 
 0.999
NBR_LOCUS1495
RPOLD domain-containing protein.
  
 0.999
NBR_LOCUS1978
RPOLD domain-containing protein.
  
 0.999
NBR_LOCUS2718
RNA_pol_L_2 domain-containing protein.
   
 0.999
NBR_LOCUS6607
DNA-directed RNA polymerase II subunit RPB3 (inferred by orthology to a human protein).
  
 0.999
NBR_LOCUS9791
Uncharacterized protein.
   
 0.999
NBR_LOCUS11155
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
  
 0.999
NBR_LOCUS14921
DNA-directed RNA polymerase II subunit RPB4 (inferred by orthology to a human protein).
   
 0.999
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
Server load: low (24%) [HD]