STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS21356Helitron_like_N domain-containing protein. (267 aa)    
Predicted Functional Partners:
NBR_LOCUS8058
Uncharacterized protein.
   
 
 0.615
NBR_LOCUS20044
Uncharacterized protein.
 
     0.588
NBR_LOCUS6781
Uncharacterized protein.
 
     0.578
NBR_LOCUS8446
Uncharacterized protein.
 
     0.554
NBR_LOCUS15010
Putative H/ACA ribonucleoprotein complex subunit 4 (inferred by orthology to a C. elegans protein).
  
 
  0.552
NBR_LOCUS11664
ATP-dependent DNA helicase; Belongs to the helicase family.
 
     0.536
NBR_LOCUS10541
DNA repair protein rad-50 (inferred by orthology to a C. elegans protein).
   
 
 0.532
NBR_LOCUS11969
Helitron_like_N domain-containing protein.
  
     0.525
NBR_LOCUS20045
Helitron_like_N domain-containing protein.
  
     0.514
NBR_LOCUS21355
Uncharacterized protein.
 
     0.510
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.