STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS21455Uncharacterized protein. (129 aa)    
Predicted Functional Partners:
NBR_LOCUS4677
Plasma membrane calcium ATPase (inferred by orthology to a D. melanogaster protein).
 
  
  0.854
NBR_LOCUS3220
Uncharacterized protein.
 
      0.762
NBR_LOCUS1964
Uncharacterized protein.
 
      0.744
NBR_LOCUS10945
Uncharacterized protein.
   
 0.637
NBR_LOCUS406
Uncharacterized protein.
    
 0.630
NBR_LOCUS5362
Uncharacterized protein.
    
 0.630
NBR_LOCUS14950
Uncharacterized protein.
    
 0.630
NBR_LOCUS20131
Uncharacterized protein.
    
 0.630
NBR_LOCUS11888
cGMP-dependent protein kinase egl-4 (inferred by orthology to a C. elegans protein).
  
 
 0.615
NBR_LOCUS6137
Troponin I 3 (inferred by orthology to a C. elegans protein).
   
  0.611
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.