STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS21762Uncharacterized protein. (131 aa)    
Predicted Functional Partners:
NBR_LOCUS9232
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 0.592
NBR_LOCUS17078
Eukaryotic translation initiation factor 4E-3 (inferred by orthology to a C. elegans protein); Belongs to the eukaryotic initiation factor 4E family.
    
 0.591
NBR_LOCUS18356
CSD domain-containing protein.
   
 0.583
NBR_LOCUS17669
Uncharacterized protein.
   
 
 0.572
NBR_LOCUS10991
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
    
  0.569
NBR_LOCUS21181
Eukaryotic initiation factor 4A-III (inferred by orthology to a human protein); Belongs to the DEAD box helicase family.
    
 0.557
NBR_LOCUS14547
Eukaryotic initiation factor 4A (inferred by orthology to a D. melanogaster protein); Belongs to the DEAD box helicase family.
    
 0.556
NBR_LOCUS9665
Defective in germ line development protein 3 (inferred by orthology to a C. elegans protein).
   
 
 0.547
NBR_LOCUS4952
Protein bicaudal C homolog 1 (inferred by orthology to a human protein).
   
 
 0.533
NBR_LOCUS12626
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
    
 0.510
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.