STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS21791Phenylalanine--tRNA ligase beta subunit (inferred by orthology to a C. elegans protein). (590 aa)    
Predicted Functional Partners:
NBR_LOCUS10623
Phenylalanine--tRNA ligase, mitochondrial (inferred by orthology to a human protein).
  
 0.999
NBR_LOCUS14674
Phenylalanine--tRNA ligase alpha subunit (inferred by orthology to a human protein).
  
 0.999
NBR_LOCUS9480
40S ribosomal protein S3 (inferred by orthology to a C. elegans protein); Belongs to the universal ribosomal protein uS3 family.
  
 
 0.987
NBR_LOCUS18797
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.984
NBR_LOCUS7769
40S ribosomal protein S15 (inferred by orthology to a C. elegans protein); Belongs to the universal ribosomal protein uS19 family.
  
 
 0.950
NBR_LOCUS14736
Serine/threonine-protein kinase RIO1 (inferred by orthology to a human protein).
    
 
 0.948
NBR_LOCUS19611
Probable elongation factor 1-beta/1-delta 1 (inferred by orthology to a C. elegans protein); Belongs to the EF-1-beta/EF-1-delta family.
 
 
    0.943
NBR_LOCUS12950
40S ribosomal protein S13 (inferred by orthology to a C. elegans protein).
  
 
 0.938
NBR_LOCUS19416
Elongation factor 1-beta (inferred by orthology to a human protein); Belongs to the EF-1-beta/EF-1-delta family.
 
 
    0.923
NBR_LOCUS12071
Obg-like ATPase 1; Hydrolyzes ATP, and can also hydrolyze GTP with lower efficiency. Has lower affinity for GTP.
  
  
 0.923
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.