STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS22435Ribosome maturation protein SBDS (inferred by orthology to a C. elegans protein). (142 aa)    
Predicted Functional Partners:
NBR_LOCUS9941
Tr-type G domain-containing protein.
  
 
 0.991
NBR_LOCUS338
Ubiquitin-60S ribosomal protein L40 (inferred by orthology to a C. elegans protein).
   
 
 0.966
NBR_LOCUS17012
60S ribosomal protein L37a (inferred by orthology to a C. elegans protein).
  
   0.957
NBR_LOCUS15493
60S ribosomal protein L10 (inferred by orthology to a C. elegans protein).
   
 
 0.924
NBR_LOCUS9039
40S ribosomal protein S19 (inferred by orthology to a C. elegans protein).
   
 
 0.880
NBR_LOCUS11866
60S ribosomal protein L24 (inferred by orthology to a C. elegans protein).
  
 
 0.879
NBR_LOCUS613
60S ribosomal protein L11 (inferred by orthology to a human protein); Belongs to the universal ribosomal protein uL5 family.
   
 
 0.866
NBR_LOCUS7221
60S ribosomal protein L11 (inferred by orthology to a human protein); Belongs to the universal ribosomal protein uL5 family.
   
 
 0.866
NBR_LOCUS9049
60S ribosomal protein L6 (inferred by orthology to a C. elegans protein).
   
 
 0.863
NBR_LOCUS15022
60S ribosomal protein L14 (inferred by orthology to a human protein).
   
 
 0.842
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.