Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
NBR_LOCUS12704 | NBR_LOCUS5737 | A0A3P7BAK0 | A0A158QWS9 | TPR_REGION domain-containing protein. | Uncharacterized protein. | 0.489 |
NBR_LOCUS12704 | NBR_LOCUS8249 | A0A3P7BAK0 | A0A0N4XYR7 | TPR_REGION domain-containing protein. | ER membrane protein complex subunit 7 homolog (inferred by orthology to a C. elegans protein). | 0.986 |
NBR_LOCUS14716 | NBR_LOCUS16902 | A0A0N4YDL2 | A0A0N4YIZ1 | Charged multivesicular body protein 2a (inferred by orthology to a human protein). | Proteasome subunit beta. | 0.417 |
NBR_LOCUS14716 | NBR_LOCUS5737 | A0A0N4YDL2 | A0A158QWS9 | Charged multivesicular body protein 2a (inferred by orthology to a human protein). | Uncharacterized protein. | 0.481 |
NBR_LOCUS14716 | NBR_LOCUS8249 | A0A0N4YDL2 | A0A0N4XYR7 | Charged multivesicular body protein 2a (inferred by orthology to a human protein). | ER membrane protein complex subunit 7 homolog (inferred by orthology to a C. elegans protein). | 0.533 |
NBR_LOCUS14716 | NBR_LOCUS9971 | A0A0N4YDL2 | A0A0N4Y2L4 | Charged multivesicular body protein 2a (inferred by orthology to a human protein). | Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway. | 0.525 |
NBR_LOCUS16902 | NBR_LOCUS14716 | A0A0N4YIZ1 | A0A0N4YDL2 | Proteasome subunit beta. | Charged multivesicular body protein 2a (inferred by orthology to a human protein). | 0.417 |
NBR_LOCUS16902 | NBR_LOCUS5737 | A0A0N4YIZ1 | A0A158QWS9 | Proteasome subunit beta. | Uncharacterized protein. | 0.410 |
NBR_LOCUS16902 | NBR_LOCUS8249 | A0A0N4YIZ1 | A0A0N4XYR7 | Proteasome subunit beta. | ER membrane protein complex subunit 7 homolog (inferred by orthology to a C. elegans protein). | 0.620 |
NBR_LOCUS16902 | NBR_LOCUS9971 | A0A0N4YIZ1 | A0A0N4Y2L4 | Proteasome subunit beta. | Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway. | 0.489 |
NBR_LOCUS20581 | NBR_LOCUS5737 | A0A0N4YTK8 | A0A158QWS9 | Uncharacterized protein. | Uncharacterized protein. | 0.450 |
NBR_LOCUS5737 | NBR_LOCUS12704 | A0A158QWS9 | A0A3P7BAK0 | Uncharacterized protein. | TPR_REGION domain-containing protein. | 0.489 |
NBR_LOCUS5737 | NBR_LOCUS14716 | A0A158QWS9 | A0A0N4YDL2 | Uncharacterized protein. | Charged multivesicular body protein 2a (inferred by orthology to a human protein). | 0.481 |
NBR_LOCUS5737 | NBR_LOCUS16902 | A0A158QWS9 | A0A0N4YIZ1 | Uncharacterized protein. | Proteasome subunit beta. | 0.410 |
NBR_LOCUS5737 | NBR_LOCUS20581 | A0A158QWS9 | A0A0N4YTK8 | Uncharacterized protein. | Uncharacterized protein. | 0.450 |
NBR_LOCUS5737 | NBR_LOCUS8249 | A0A158QWS9 | A0A0N4XYR7 | Uncharacterized protein. | ER membrane protein complex subunit 7 homolog (inferred by orthology to a C. elegans protein). | 0.544 |
NBR_LOCUS5737 | NBR_LOCUS9971 | A0A158QWS9 | A0A0N4Y2L4 | Uncharacterized protein. | Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway. | 0.434 |
NBR_LOCUS8249 | NBR_LOCUS12704 | A0A0N4XYR7 | A0A3P7BAK0 | ER membrane protein complex subunit 7 homolog (inferred by orthology to a C. elegans protein). | TPR_REGION domain-containing protein. | 0.986 |
NBR_LOCUS8249 | NBR_LOCUS14716 | A0A0N4XYR7 | A0A0N4YDL2 | ER membrane protein complex subunit 7 homolog (inferred by orthology to a C. elegans protein). | Charged multivesicular body protein 2a (inferred by orthology to a human protein). | 0.533 |
NBR_LOCUS8249 | NBR_LOCUS16902 | A0A0N4XYR7 | A0A0N4YIZ1 | ER membrane protein complex subunit 7 homolog (inferred by orthology to a C. elegans protein). | Proteasome subunit beta. | 0.620 |
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