STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS7246tRNA (guanine(10)-N2)-methyltransferase homolog (inferred by orthology to a human protein). (405 aa)    
Predicted Functional Partners:
NBR_LOCUS18443
Uncharacterized protein.
   
 0.996
NBR_LOCUS17071
Uncharacterized protein.
   
 0.990
NBR_LOCUS15776
tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like (inferred by orthology to a human protein).
  
  
 0.915
NBR_LOCUS888
Ribosome biogenesis protein WDR12 homolog (inferred by orthology to a C. elegans protein).
   
   0.880
NBR_LOCUS6538
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
   
  
 0.852
NBR_LOCUS16606
Ribosome production factor 2 homolog (inferred by orthology to a C. elegans protein).
   
    0.850
NBR_LOCUS13147
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
   
  
 0.849
NBR_LOCUS14119
U3 small nucleolar ribonucleoprotein protein IMP4 (inferred by orthology to a human protein).
   
    0.840
NBR_LOCUS14047
WD_REPEATS_REGION domain-containing protein.
   
  
 0.839
NBR_LOCUS8119
Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
   
 
 0.836
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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