STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS9058Cystathionine beta-synthase (inferred by orthology to a human protein). (690 aa)    
Predicted Functional Partners:
NBR_LOCUS9729
Cystathionine gamma-lyase (inferred by orthology to a human protein).
 
 0.990
NBR_LOCUS1411
Adenosylhomocysteinase.
  
 0.967
NBR_LOCUS10956
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
 
 0.955
NBR_LOCUS7371
Hcy-binding domain-containing protein.
  
 
 0.952
NBR_LOCUS9134
Serine racemase (inferred by orthology to a human protein).
    
 0.944
NBR_LOCUS11843
PALP domain-containing protein.
    
 0.944
NBR_LOCUS6740
Uncharacterized protein.
  
 0.943
NBR_LOCUS6711
Kynurenine--oxoglutarate transaminase 1 (inferred by orthology to a human protein).
  
 
 0.937
NBR_LOCUS19277
Serine--pyruvate aminotransferase.
  
 
 0.894
NBR_LOCUS20077
Serine--pyruvate aminotransferase (inferred by orthology to a human protein).
  
 
 0.894
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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