STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS9582RUN domain-containing protein. (893 aa)    
Predicted Functional Partners:
NBR_LOCUS9761
Uncharacterized protein.
    
 0.919
NBR_LOCUS183
Beige/beach protein-related (inferred by orthology to a S. mansoni protein).
   
 
 0.830
NBR_LOCUS2955
Uncharacterized protein.
   
 
 0.830
NBR_LOCUS17239
Uncharacterized protein.
   
 
 0.830
NBR_LOCUS9110
Differentially expressed in FDCP 8 homolog (inferred by orthology to a C. elegans protein).
  
 
0.692
NBR_LOCUS6423
C2H2-type domain-containing protein.
    
 0.623
NBR_LOCUS14058
Uncharacterized protein.
    
 0.623
NBR_LOCUS12449
Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
     
 0.622
NBR_LOCUS14261
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
     
 0.585
NBR_LOCUS15075
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
     
 0.585
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.