STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS9974Uncharacterized protein. (774 aa)    
Predicted Functional Partners:
NBR_LOCUS13187
Netrin-1 (inferred by orthology to a human protein).
    
 0.964
NBR_LOCUS17455
Netrin unc-6 (inferred by orthology to a C. elegans protein).
    
 0.964
NBR_LOCUS16044
Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.
   
 0.861
NBR_LOCUS18982
DRAG-1 (inferred by orthology to a C. elegans protein).
   
 0.816
NBR_LOCUS19652
DRAG-1 (inferred by orthology to a C. elegans protein).
   
 0.816
NBR_LOCUS21921
DRAG-1 (inferred by orthology to a C. elegans protein).
   
 0.816
NBR_LOCUS7146
Laminin subunit beta-1 (inferred by orthology to a D. melanogaster protein).
    
 0.813
NBR_LOCUS12375
Uncharacterized protein; Belongs to the peptidase C14A family.
    
  0.813
NBR_LOCUS17389
Cell death protein 6 (inferred by orthology to a C. elegans protein).
    
  0.768
NBR_LOCUS283
Uncharacterized protein.
   
  0.767
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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