STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS11208Probable exosome complex exonuclease RRP44 (inferred by orthology to a C. elegans protein); Belongs to the RNR ribonuclease family. (1093 aa)    
Predicted Functional Partners:
NBR_LOCUS13075
Exosome complex component CSL4 (inferred by orthology to a human protein).
   
 0.995
NBR_LOCUS22051
Exosome component 10 (inferred by orthology to a human protein).
   
 0.993
NBR_LOCUS12833
Exosome complex component RRP4 (inferred by orthology to a human protein).
   
 0.992
NBR_LOCUS13165
Exosome complex component RRP4 (inferred by orthology to a human protein).
   
 0.992
NBR_LOCUS13334
Putative exosome complex component RRP41 (inferred by orthology to a C. elegans protein).
   
 0.990
NBR_LOCUS20116
Exosome complex component RRP46 (inferred by orthology to a human protein).
   
 0.990
NBR_LOCUS1691
Exosome complex component RRP45 (inferred by orthology to a human protein).
   
 0.989
NBR_LOCUS3967
Uncharacterized protein.
   
 0.989
NBR_LOCUS13476
Exosome complex component RRP42 (inferred by orthology to a human protein).
   
 0.989
NBR_LOCUS8954
mRNA transport homolog 4 (inferred by orthology to a C. elegans protein).
   
 0.989
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.