STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS11314Uncharacterized protein. (257 aa)    
Predicted Functional Partners:
NBR_LOCUS20868
Uncharacterized protein.
 
      0.632
NBR_LOCUS5627
Gelsolin-like protein 1 (inferred by orthology to a C. elegans protein).
    
 
 0.562
NBR_LOCUS14430
Gelsolin-like protein 1 (inferred by orthology to a C. elegans protein).
    
 
 0.562
NBR_LOCUS11215
Uncharacterized protein.
    
 
 0.527
NBR_LOCUS7969
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
    
 
 0.423
NBR_LOCUS9350
Serine/threonine-protein phosphatase.
   
   0.409
NBR_LOCUS1003
Uncharacterized protein.
    
 
 0.404
NBR_LOCUS1767
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 
 0.404
NBR_LOCUS3458
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 
 0.404
NBR_LOCUS4521
Kinesin like protein KLP-6 (inferred by orthology to a C. elegans protein).
    
 
 0.404
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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