STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS11543Death-associated protein kinase dapk-1 (inferred by orthology to a C. elegans protein). (1010 aa)    
Predicted Functional Partners:
NBR_LOCUS9133
Serine/threonine kinase (inferred by orthology to a S. mansoni protein); Belongs to the protein kinase superfamily.
 
  
  0.909
NBR_LOCUS9516
Protein kinase domain-containing protein.
 
      0.900
NBR_LOCUS11541
Protein kinase domain-containing protein.
 
      0.900
NBR_LOCUS19728
Beclin-1 (inferred by orthology to a human protein).
    
 0.888
NBR_LOCUS17231
Calmodulin (inferred by orthology to a C. elegans protein); Belongs to the calmodulin family.
   
 0.886
NBR_LOCUS1695
Uncharacterized protein; Belongs to the calmodulin family.
   
 0.886
NBR_LOCUS12952
Calmodulin-like protein 3 (inferred by orthology to a human protein).
   
 0.785
NBR_LOCUS9230
BZIP domain-containing protein.
   
  0.751
NBR_LOCUS10843
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
    
 0.731
NBR_LOCUS20732
Mitogen-activated protein kinase.
    
 0.731
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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