STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS11859Serine/threonine-protein kinase Doa (inferred by orthology to a D. melanogaster protein). (923 aa)    
Predicted Functional Partners:
NBR_LOCUS15856
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
   
    0.758
NBR_LOCUS8971
Probable splicing factor, arginine/serine-rich 7 (inferred by orthology to a C. elegans protein).
   
 
 0.684
NBR_LOCUS3535
Serine/threonine-protein kinase spk-1 (inferred by orthology to a C. elegans protein); Belongs to the protein kinase superfamily.
    
 
0.624
NBR_LOCUS3659
Serine/threonine-protein kinase spk-1 (inferred by orthology to a C. elegans protein); Belongs to the protein kinase superfamily.
    
 
0.624
NBR_LOCUS5190
Uncharacterized protein.
    
 
 0.624
NBR_LOCUS20673
N-acetyltransferase domain-containing protein.
    
 
 0.624
NBR_LOCUS17155
Protein kinase domain-containing protein.
    
 
0.624
NBR_LOCUS578
Uncharacterized protein.
    
 
 0.624
NBR_LOCUS1490
Multiple exostoses homolog 1 (inferred by orthology to a C. elegans protein); Belongs to the glycosyltransferase 47 family.
 
      0.603
NBR_LOCUS22243
Probable splicing factor, arginine/serine-rich 3 (inferred by orthology to a C. elegans protein).
    
 
 0.601
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.