STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS12119Rho GTPase activating protein at 71E (inferred by orthology to a D. melanogaster protein). (386 aa)    
Predicted Functional Partners:
NBR_LOCUS6598
Ras-like GTP-binding protein rhoA (inferred by orthology to a C. elegans protein).
   
 0.817
NBR_LOCUS12076
Rho GTPase-activating protein 92B (inferred by orthology to a D. melanogaster protein).
   
 
 0.722
NBR_LOCUS9908
Rho-related GTP-binding protein RhoG (inferred by orthology to a human protein).
   
 0.703
NBR_LOCUS12164
Uncharacterized protein.
   
 0.703
NBR_LOCUS5729
Uncharacterized protein.
   
 0.703
NBR_LOCUS13303
Cell division control protein 42 homolog (inferred by orthology to a C. elegans protein).
   
 0.703
NBR_LOCUS2676
Uncharacterized protein.
   
 0.638
NBR_LOCUS2893
Uncharacterized protein.
   
 0.638
NBR_LOCUS6016
Uncharacterized protein.
   
 0.638
NBR_LOCUS6564
Uncharacterized protein.
   
 0.638
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.