STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS12186Uncoordinated protein 79 (inferred by orthology to a C. elegans protein). (1103 aa)    
Predicted Functional Partners:
NBR_LOCUS924
Tetratricopeptide repeat protein 21 homolog (inferred by orthology to a C. elegans protein).
   
 0.996
NBR_LOCUS4142
TPR_REGION domain-containing protein.
   
 0.996
NBR_LOCUS8514
EF-hand domain-containing protein.
   
 0.996
NBR_LOCUS11072
Uncharacterized protein.
   
 0.996
NBR_LOCUS12399
Voltage-dependent L-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death; Belongs to the calcium channel alpha-1 subunit (TC 1.A.1.11) family.
   
 0.996
NBR_LOCUS13026
Ca_chan_IQ domain-containing protein.
   
 0.996
NBR_LOCUS16795
Tetratricopeptide repeat protein 21 homolog (inferred by orthology to a C. elegans protein).
   
 0.996
NBR_LOCUS18710
Tetratricopeptide repeat protein 21 homolog (inferred by orthology to a C. elegans protein).
   
 0.996
NBR_LOCUS18712
TPR_REGION domain-containing protein.
   
 0.996
NBR_LOCUS6973
Sodium leak channel non-selective protein (inferred by orthology to a human protein).
   
 0.996
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.