STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS12742Guanine nucleotide-binding protein-like 3 homolog (inferred by orthology to a C. elegans protein). (599 aa)    
Predicted Functional Partners:
NBR_LOCUS888
Ribosome biogenesis protein WDR12 homolog (inferred by orthology to a C. elegans protein).
   
 0.999
NBR_LOCUS3117
MKI67 FHA domain-interacting nucleolar phosphoprotein (inferred by orthology to a human protein).
   
 
 0.999
NBR_LOCUS12664
Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family.
   
 
 0.999
NBR_LOCUS13617
Protein MAK16 homolog (inferred by orthology to a human protein).
   
 
 0.999
NBR_LOCUS14717
Putative ribosomal RNA methyltransferase NOP2 (inferred by orthology to a human protein); Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
 
 0.999
NBR_LOCUS16505
Nucleolar GTP-binding protein 2 (inferred by orthology to a human protein).
  
0.999
NBR_LOCUS16740
Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.
   
0.999
NBR_LOCUS17096
Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits.
   
 
 0.999
NBR_LOCUS20150
Nucleolar complex protein 3 homolog.
   
 
 0.999
NBR_LOCUS22114
Ribosome biogenesis protein BOP1 homolog (inferred by orthology to a C. elegans protein).
   
 0.999
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.