STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS13068Zinc transporter ZIP2 (inferred by orthology to a human protein). (323 aa)    
Predicted Functional Partners:
NBR_LOCUS7042
Casein kinase II subunit alpha (inferred by orthology to a C. elegans protein); Belongs to the protein kinase superfamily.
    
 0.895
NBR_LOCUS17964
SAM50-like protein gop-3 (inferred by orthology to a C. elegans protein).
    
 
 0.792
NBR_LOCUS16106
Metaxin-1 homolog (inferred by orthology to a C. elegans protein).
    
 
 0.762
NBR_LOCUS6097
Mitochondrial import receptor subunit TOM40 homolog (inferred by orthology to a C. elegans protein).
   
 
 0.640
NBR_LOCUS4605
Dynamin (inferred by orthology to a C. elegans protein); Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
     
 0.582
NBR_LOCUS17424
Uncharacterized protein.
     
 0.582
NBR_LOCUS17750
Dynamin (inferred by orthology to a C. elegans protein); Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
     
 0.582
NBR_LOCUS6215
Dynamin-1-like protein (inferred by orthology to a human protein); Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
     
 0.582
NBR_LOCUS13997
Transmembrane GTPase fzo-1 (inferred by orthology to a C. elegans protein); Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
     
 0.578
NBR_LOCUS7703
Uncharacterized protein.
    
 
 0.566
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.