STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS13637PDCD2_C domain-containing protein. (616 aa)    
Predicted Functional Partners:
NBR_LOCUS15831
40S ribosomal protein S2 (inferred by orthology to a C. elegans protein); Belongs to the universal ribosomal protein uS5 family.
    
 
 0.752
NBR_LOCUS19603
40S ribosomal protein S2 (inferred by orthology to a C. elegans protein).
    
 
 0.752
NBR_LOCUS9730
Protein BCCIP homolog (inferred by orthology to a C. elegans protein).
   
  
 0.725
NBR_LOCUS21707
Uncharacterized protein.
    
 
 0.722
NBR_LOCUS13473
Protein LTV1 homolog (inferred by orthology to a C. elegans protein).
   
  
 0.630
NBR_LOCUS15755
Zinc finger protein 277 (inferred by orthology to a human protein).
   
 
 0.584
NBR_LOCUS17516
Zinc finger protein 277 (inferred by orthology to a human protein).
   
 
 0.584
NBR_LOCUS8119
Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
   
 
 0.531
NBR_LOCUS11150
Ribosome biogenesis methyltransferase WBSCR22 (inferred by orthology to a human protein).
   
 
 0.522
NBR_LOCUS16560
Ribosome biogenesis methyltransferase WBSCR22 (inferred by orthology to a human protein).
   
 
 0.522
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.