STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS15346Bifunctional polynucleotide phosphatase/kinase (inferred by orthology to a human protein). (346 aa)    
Predicted Functional Partners:
NBR_LOCUS10097
L-fucose kinase (inferred by orthology to a human protein).
  
 
 0.982
NBR_LOCUS7905
Transcription termination factor 2 (inferred by orthology to a human protein).
  
 
 0.980
NBR_LOCUS10671
GDP-mannose 4,6 dehydratase (inferred by orthology to a human protein).
    
 0.929
NBR_LOCUS6819
Transket_pyr domain-containing protein.
    
 0.897
NBR_LOCUS9770
DNA ligase 3 (inferred by orthology to a human protein); Belongs to the ATP-dependent DNA ligase family.
   
 0.871
NBR_LOCUS16122
DNA ligase 3 (inferred by orthology to a human protein).
   
 0.871
NBR_LOCUS7071
DNA ligase 4 (inferred by orthology to a human protein).
   
 0.869
NBR_LOCUS7182
DNA ligase.
   
 0.856
NBR_LOCUS7871
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.850
NBR_LOCUS3429
Inositol monophosphatase ttx-7 (inferred by orthology to a C. elegans protein).
   
 
 0.842
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.