STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS16129Uncharacterized protein. (452 aa)    
Predicted Functional Partners:
NBR_LOCUS18376
MGS domain-containing protein.
     
 0.935
NBR_LOCUS12814
Adenine phosphoribosyltransferase (inferred by orthology to a C. elegans protein).
     
 0.932
NBR_LOCUS16615
Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.
     
 0.930
NBR_LOCUS12130
Uncharacterized protein.
     
 0.930
NBR_LOCUS3552
Nucleoside diphosphate kinase.
     
 0.861
NBR_LOCUS5604
Ribonucleoside-diphosphate reductase large subunit (inferred by orthology to a C. elegans protein).
     
 0.861
NBR_LOCUS10767
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
     
 0.861
NBR_LOCUS14599
Nucleoside diphosphate kinase (inferred by orthology to a C. elegans protein).
     
 0.861
NBR_LOCUS8192
Nucleoside-diphosphatase uda-1 (inferred by orthology to a C. elegans protein); Belongs to the GDA1/CD39 NTPase family.
    
 0.836
NBR_LOCUS246
Phosphodiesterase.
     
 0.830
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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