STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS16213Uncharacterized protein. (761 aa)    
Predicted Functional Partners:
NBR_LOCUS21257
Uncharacterized protein.
    
 0.997
NBR_LOCUS3980
Nucleoporin ndc-1 (inferred by orthology to a C. elegans protein).
    
 0.932
NBR_LOCUS4635
Nucleoporin ndc-1 (inferred by orthology to a C. elegans protein).
    
 0.932
NBR_LOCUS19781
Nucleoporin ndc-1 (inferred by orthology to a C. elegans protein).
    
 0.932
NBR_LOCUS7642
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.911
NBR_LOCUS20226
Nucleoporin NUP53 (inferred by orthology to a C. elegans protein).
    
 0.879
NBR_LOCUS461
Uncharacterized protein.
   
 0.872
NBR_LOCUS12224
Nuclear pore complex protein Nup155 (inferred by orthology to a human protein).
   
 0.870
NBR_LOCUS10436
Nucleoporin SEH1 (inferred by orthology to a C. elegans protein); Belongs to the WD repeat SEC13 family.
   
 0.869
NBR_LOCUS9376
Nuclear pore complex protein 15 (inferred by orthology to a C. elegans protein).
   
 0.867
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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