STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS17522Uncharacterized protein. (613 aa)    
Predicted Functional Partners:
NBR_LOCUS20691
28S ribosomal protein S33, mitochondrial (inferred by orthology to a human protein).
   
 
 0.665
NBR_LOCUS7889
SAP domain-containing protein.
     
 0.622
NBR_LOCUS10418
Phosphatidylinositide phosphatase SAC1 (inferred by orthology to a human protein).
     
 0.593
NBR_LOCUS13005
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
     
 0.580
NBR_LOCUS7969
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
     
 0.575
NBR_LOCUS1105
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
   
 
 0.559
NBR_LOCUS11220
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
   
 
 0.559
NBR_LOCUS5551
EF-hand domain-containing protein.
   
 
  0.549
NBR_LOCUS10066
Non-specific serine/threonine protein kinase.
   
 
  0.549
NBR_LOCUS11404
Uncharacterized protein.
   
 
  0.549
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.