STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS2541Uncharacterized protein. (345 aa)    
Predicted Functional Partners:
NBR_LOCUS3527
Peptidase_M1 domain-containing protein.
 
      0.900
NBR_LOCUS6360
Uncharacterized protein.
    
 0.814
NBR_LOCUS21826
Peptidase_M1 domain-containing protein.
 
      0.634
NBR_LOCUS12326
Aspartate aminotransferase.
   
 0.594
NBR_LOCUS18688
Dihydrolipoyl dehydrogenase.
  
 0.549
NBR_LOCUS17097
Ubiquitin-40S ribosomal protein S27a (inferred by orthology to a human protein).
    
  0.538
NBR_LOCUS1802
Probable glutathione reductase 2 (inferred by orthology to a C. elegans protein).
   
 0.512
NBR_LOCUS17851
Thioredoxin reductase 1 (inferred by orthology to a C. elegans protein); Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
   
 0.512
NBR_LOCUS20073
Glutathione reductase, mitochondrial (inferred by orthology to a human protein).
   
 0.512
NBR_LOCUS21026
Probable glutathione reductase 2 (inferred by orthology to a C. elegans protein).
   
 0.512
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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