STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS11284Peptidase_M3 domain-containing protein. (538 aa)    
Predicted Functional Partners:
NBR_LOCUS5795
Rab-3-interacting molecule unc-10 (inferred by orthology to a C. elegans protein).
   
   0.842
NBR_LOCUS5796
Uncharacterized protein.
   
   0.842
NBR_LOCUS5661
Abhydrolase_3 domain-containing protein.
     
 0.720
NBR_LOCUS6896
Uncharacterized protein.
     
 0.720
NBR_LOCUS21928
Uncharacterized protein.
     
 0.720
NBR_LOCUS6391
Hormone-sensitive lipase (inferred by orthology to a human protein).
     
 0.692
NBR_LOCUS11727
Kynurenine formamidase (inferred by orthology to a D. melanogaster protein).
     
 0.692
NBR_LOCUS13744
Frataxin, mitochondrial (inferred by orthology to a C. elegans protein).
   
 
 0.637
NBR_LOCUS11812
Dipeptidase C (inferred by orthology to a D. melanogaster protein).
   
 
 0.603
NBR_LOCUS14018
Ribonuclease Z (inferred by orthology to a C. elegans protein).
  
  
 0.590
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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