STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS4735tRNA-synt_1c_C domain-containing protein. (89 aa)    
Predicted Functional Partners:
NBR_LOCUS9082
Methionine--tRNA ligase, cytoplasmic (inferred by orthology to a C. elegans protein); Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.999
NBR_LOCUS18797
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.999
NBR_LOCUS11772
60S ribosomal protein L23a (inferred by orthology to a human protein).
  
 0.993
NBR_LOCUS18464
60S ribosomal protein L21 (inferred by orthology to a C. elegans protein).
   
 0.993
NBR_LOCUS7875
60S ribosomal protein L31 (inferred by orthology to a C. elegans protein).
   
 0.992
NBR_LOCUS12213
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 0.992
NBR_LOCUS20467
60S ribosomal protein L9 (inferred by orthology to a C. elegans protein).
  
 0.992
NBR_LOCUS11866
60S ribosomal protein L24 (inferred by orthology to a C. elegans protein).
  
 0.991
NBR_LOCUS502
60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.
   
 0.990
NBR_LOCUS10635
60S ribosomal protein L23 (inferred by orthology to a C. elegans protein); Belongs to the universal ribosomal protein uL14 family.
  
 0.990
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.