STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KGM_208468Vacuolar protein sorting-associated protein 35. (222 aa)    
Predicted Functional Partners:
KGM_203820
Subunit splicing factor 3b.
    
 
 0.913
KGM_206070
Splicing factor 3B subunit 1 like protein.
    
 
 0.870
KGM_207257
Splicing factor 3B subunit 3.
    
 
 0.862
KGM_204538B
Putative Pre-mRNA splicing factor SF3B subunit.
    
 
 0.838
KGM_204537
Splicing factor 3B subunit 5; Belongs to the SF3B5 family.
    
 
 0.838
KGM_203263
Uncharacterized protein.
   
 
 0.815
KGM_211949
Splicing factor 3A subunit 2.
   
 
 0.602
KGM_204107
Putative spliceosome associated protein.
   
 
 0.585
KGM_215731
U2 snRNP-associated SURP motif-containing protein.
    
 
 0.540
KGM_214303
RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II.
      
 0.515
Your Current Organism:
Danaus plexippus
NCBI taxonomy Id: 278856
Other names: D. plexippus plexippus, Danaus plexippus plexippus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.