Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KGM_200131 | KGM_202562 | A0A212EKT3 | A0A212ESP5 | Downstream neighbor of son protein. | Uncharacterized protein. | 0.643 |
KGM_200131 | KGM_202602 | A0A212EKT3 | A0A212EIY5 | Downstream neighbor of son protein. | DNA replication licensing factor MCM9 like protein; Belongs to the MCM family. | 0.679 |
KGM_200131 | KGM_202858 | A0A212EKT3 | A0A212F1Z0 | Downstream neighbor of son protein. | Lethal. | 0.635 |
KGM_200131 | KGM_204101 | A0A212EKT3 | A0A212F6W0 | Downstream neighbor of son protein. | DNA helicase; Belongs to the MCM family. | 0.586 |
KGM_200131 | KGM_204841 | A0A212EKT3 | A0A212FGV8 | Downstream neighbor of son protein. | DNA polymerase delta small subunit. | 0.601 |
KGM_200131 | KGM_206359 | A0A212EKT3 | A0A212F6U9 | Downstream neighbor of son protein. | Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family. | 0.763 |
KGM_200131 | KGM_207360 | A0A212EKT3 | A0A212EJ32 | Downstream neighbor of son protein. | DNA helicase; Belongs to the MCM family. | 0.827 |
KGM_200131 | KGM_210425 | A0A212EKT3 | A0A212FNP7 | Downstream neighbor of son protein. | Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. | 0.906 |
KGM_200131 | KGM_213934 | A0A212EKT3 | A0A212F0F0 | Downstream neighbor of son protein. | Replication factor C4. | 0.730 |
KGM_200131 | KGM_214279 | A0A212EKT3 | A0A212ERG6 | Downstream neighbor of son protein. | DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family. | 0.804 |
KGM_202562 | KGM_200131 | A0A212ESP5 | A0A212EKT3 | Uncharacterized protein. | Downstream neighbor of son protein. | 0.643 |
KGM_202562 | KGM_202858 | A0A212ESP5 | A0A212F1Z0 | Uncharacterized protein. | Lethal. | 0.626 |
KGM_202562 | KGM_204101 | A0A212ESP5 | A0A212F6W0 | Uncharacterized protein. | DNA helicase; Belongs to the MCM family. | 0.618 |
KGM_202562 | KGM_204841 | A0A212ESP5 | A0A212FGV8 | Uncharacterized protein. | DNA polymerase delta small subunit. | 0.668 |
KGM_202562 | KGM_207360 | A0A212ESP5 | A0A212EJ32 | Uncharacterized protein. | DNA helicase; Belongs to the MCM family. | 0.436 |
KGM_202562 | KGM_210425 | A0A212ESP5 | A0A212FNP7 | Uncharacterized protein. | Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. | 0.703 |
KGM_202562 | KGM_213934 | A0A212ESP5 | A0A212F0F0 | Uncharacterized protein. | Replication factor C4. | 0.964 |
KGM_202562 | KGM_214279 | A0A212ESP5 | A0A212ERG6 | Uncharacterized protein. | DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family. | 0.900 |
KGM_202602 | KGM_200131 | A0A212EIY5 | A0A212EKT3 | DNA replication licensing factor MCM9 like protein; Belongs to the MCM family. | Downstream neighbor of son protein. | 0.679 |
KGM_202602 | KGM_202858 | A0A212EIY5 | A0A212F1Z0 | DNA replication licensing factor MCM9 like protein; Belongs to the MCM family. | Lethal. | 0.612 |
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