STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KGM_214209Putative 2-phosphodiesterase. (399 aa)    
Predicted Functional Partners:
KGM_208376
CCR4-NOT transcription complex subunit 1 isoform 1.
   
 0.905
KGM_200944
Cell differentiation protein RCD1.
    
 0.903
KGM_204689
CCR4-NOT transcription complex subunit 2.
    
 0.888
KGM_213701
Putative ATP-dependent RNA helicase me31b like protein; Belongs to the DEAD box helicase family.
    
 0.847
KGM_204479
Parafibromin.
   
 
 0.793
KGM_213770
RNA polymerase II-associated factor 1 protein.
    
   0.778
KGM_203690
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.778
KGM_215986
Ccr4-associated factor.
    
 0.737
KGM_215987
Ccr4-associated factor.
    
 0.737
KGM_204187
Uncharacterized protein.
    
 0.729
Your Current Organism:
Danaus plexippus
NCBI taxonomy Id: 278856
Other names: D. plexippus plexippus, Danaus plexippus plexippus
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