STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KGM_215179FoP_duplication domain-containing protein. (229 aa)    
Predicted Functional Partners:
KGM_206827
ATP-dependent RNA helicase DDX39A.
   
 0.899
KGM_204983
SAP domain-containing ribonucleoprotein.
   
 0.883
KGM_207793
ALY protein.
   
 0.873
KGM_203041
Polymerase delta interacting protein 3.
   
 0.826
KGM_207766
THO complex subunit 5 protein.
   
 0.787
KGM_207134
Serine/arginine-rich splicing factor 1 like protein.
   
 
 0.783
KGM_207477
THO complex subunit 2 like protein.
   
 0.746
KGM_209248
Putative serine-threonine kinase receptor-associated protein.
   
    0.746
KGM_214413
Putative enhancer of rudimentary protein.
   
 
 0.732
KGM_205270
THO complex subunit 7 protein.
    
 0.717
Your Current Organism:
Danaus plexippus
NCBI taxonomy Id: 278856
Other names: D. plexippus plexippus, Danaus plexippus plexippus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.