STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KGM_200279Putative sorting nexin 8. (299 aa)    
Predicted Functional Partners:
KGM_207550
Uncharacterized protein.
    
 0.999
KGM_212684
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
   
 
 0.843
KGM_200454
Sorting nexin; Involved in several stages of intracellular trafficking.
   
 0.738
KGM_200455
Vps5 domain-containing protein.
   
 0.738
KGM_207861
VWFA domain-containing protein.
    
 
 0.658
KGM_205878
Putative vacuolar protein sorting 26 vps26.
    
 
 0.658
KGM_207010
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 0.613
KGM_200730
Sorting nexin; Belongs to the sorting nexin family.
   
 0.595
KGM_200601
Sorting nexin 12.
    
 
 0.570
KGM_214449
Putative sorting nexin family member 30.
   
 
0.563
Your Current Organism:
Danaus plexippus
NCBI taxonomy Id: 278856
Other names: D. plexippus plexippus, Danaus plexippus plexippus
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.