A0A4Z1IPE0 protein (Botrytis elliptica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A4Z1IPE0

Uncharacterized protein. (356 aa)

Predicted Functional Partners:

A0A4Z1K382

0.997

A0A4Z1JAF5

0.982

A0A4Z1K4V4

0.979

A0A4Z1IR23

0.973

A0A4Z1JD22

0.963

A0A4Z1JUZ8

0.960

A0A4Z1JX03

0.930

A0A4Z1KGS3

0.921

A0A4Z1K973

0.887

A0A4Z1K0L4

0.875

Your Current Organism:

Botrytis elliptica

NCBI taxonomy Id: 278938
Other names: B. elliptica

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A4Z1IPE0	A0A4Z1IR23	Uncharacterized protein.	Uncharacterized protein.	0.973
A0A4Z1IPE0	A0A4Z1JAF5	Uncharacterized protein.	Uncharacterized protein.	0.982
A0A4Z1IPE0	A0A4Z1JD22	Uncharacterized protein.	Uncharacterized protein.	0.963
A0A4Z1IPE0	A0A4Z1JUZ8	Uncharacterized protein.	Uncharacterized protein.	0.960
A0A4Z1IPE0	A0A4Z1JX03	Uncharacterized protein.	Uncharacterized protein.	0.930
A0A4Z1IPE0	A0A4Z1K0L4	Uncharacterized protein.	Uncharacterized protein.	0.875
A0A4Z1IPE0	A0A4Z1K382	Uncharacterized protein.	Uncharacterized protein.	0.997
A0A4Z1IPE0	A0A4Z1K4V4	Uncharacterized protein.	Bac_surface_Ag domain-containing protein.	0.979
A0A4Z1IPE0	A0A4Z1K973	Uncharacterized protein.	zf-Tim10_DDP domain-containing protein.	0.887
A0A4Z1IPE0	A0A4Z1KGS3	Uncharacterized protein.	Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	0.921
A0A4Z1IR23	A0A4Z1IPE0	Uncharacterized protein.	Uncharacterized protein.	0.973
A0A4Z1IR23	A0A4Z1JAF5	Uncharacterized protein.	Uncharacterized protein.	0.998
A0A4Z1IR23	A0A4Z1JD22	Uncharacterized protein.	Uncharacterized protein.	0.586
A0A4Z1IR23	A0A4Z1JUZ8	Uncharacterized protein.	Uncharacterized protein.	0.879
A0A4Z1IR23	A0A4Z1JX03	Uncharacterized protein.	Uncharacterized protein.	0.486
A0A4Z1IR23	A0A4Z1K0L4	Uncharacterized protein.	Uncharacterized protein.	0.684
A0A4Z1IR23	A0A4Z1K382	Uncharacterized protein.	Uncharacterized protein.	0.976
A0A4Z1IR23	A0A4Z1K4V4	Uncharacterized protein.	Bac_surface_Ag domain-containing protein.	0.643
A0A4Z1IR23	A0A4Z1K973	Uncharacterized protein.	zf-Tim10_DDP domain-containing protein.	0.588
A0A4Z1IR23	A0A4Z1KGS3	Uncharacterized protein.	Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	0.702