STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Z1JCE2Uncharacterized protein. (578 aa)    
Predicted Functional Partners:
A0A4Z1JLU3
RRM domain-containing protein.
    
 
 0.884
A0A4Z1J257
Splicing factor subunit; Belongs to the SF3B5 family.
    
 
 0.865
A0A4Z1K6C0
SF3b1 domain-containing protein.
    
 
 0.838
A0A4Z1JAR7
CID domain-containing protein.
   
 
 0.785
A0A4Z1JMB0
Uncharacterized protein.
    
 
 0.700
A0A4Z1K2K1
CPSF_A domain-containing protein.
    
 
 0.700
A0A4Z1J388
Matrin-type domain-containing protein.
   
 
 0.646
A0A4Z1JUV5
Uncharacterized protein.
    
 
 0.583
A0A4Z1JVK2
Matrin-type domain-containing protein.
   
 
 0.524
A0A4Z1JXP0
Uncharacterized protein.
   
 
 0.513
Your Current Organism:
Botrytis elliptica
NCBI taxonomy Id: 278938
Other names: B. elliptica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.