STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Z1JDV4HORMA domain-containing protein. (297 aa)    
Predicted Functional Partners:
A0A4Z1JVL9
DNA polymerase.
    
 0.999
A0A4Z1JD35
DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.
   
 0.997
A0A4Z1K6N4
UmuC domain-containing protein.
    
 0.973
A0A4Z1KEN0
Uncharacterized protein.
    
 
 0.957
A0A4Z1K0X5
Uncharacterized protein.
    
 
 0.949
A0A4Z1JVH3
UmuC domain-containing protein.
    
 0.940
A0A4Z1JG80
DNA polymerase.
    
 0.933
A0A4Z1JLL3
UmuC domain-containing protein.
    
 0.930
A0A4Z1JBU2
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
    
 0.925
A0A4Z1K3I6
HORMA domain-containing protein.
    
 0.908
Your Current Organism:
Botrytis elliptica
NCBI taxonomy Id: 278938
Other names: B. elliptica
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