STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Z1JDY6ATP-dependent RNA helicase DBP10. (920 aa)    
Predicted Functional Partners:
A0A4Z1JRT9
CP-type G domain-containing protein.
   
 0.978
A0A4Z1K075
SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
 
 0.978
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
  0.974
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.959
A0A4Z1KBL1
Uncharacterized protein.
   
 
 0.959
A0A4Z1K4D7
Uncharacterized protein.
   
 0.952
A0A4Z1JG84
RRM domain-containing protein.
   
 
 0.951
A0A4Z1IVM3
Uncharacterized protein.
  
 
0.949
A0A4Z1JZZ7
Brix domain-containing protein.
   
   0.949
A0A4Z1K3M7
Sas10 domain-containing protein.
   
  0.949
Your Current Organism:
Botrytis elliptica
NCBI taxonomy Id: 278938
Other names: B. elliptica
Server load: low (14%) [HD]