STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Z1JF61Uncharacterized protein. (371 aa)    
Predicted Functional Partners:
A0A4Z1J1Y8
Amb_all domain-containing protein.
     
 0.900
A0A4Z1JTV2
Uncharacterized protein.
     
 0.791
A0A4Z1JEL5
Alpha-L-AF_C domain-containing protein.
     
 0.771
A0A4Z1K234
Alpha-L-AF_C domain-containing protein.
     
 0.771
A0A4Z1J2D1
Fn3_like domain-containing protein.
    
  0.744
A0A4Z1JD49
Fn3_like domain-containing protein.
    
  0.744
A0A4Z1K2I9
Uncharacterized protein.
    
 0.645
A0A4Z1K2X5
Uncharacterized protein.
    
  0.631
A0A4Z1IPE0
Uncharacterized protein.
    
  0.615
A0A4Z1JUV1
MPN domain-containing protein.
    
  0.598
Your Current Organism:
Botrytis elliptica
NCBI taxonomy Id: 278938
Other names: B. elliptica
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