STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Z1JHL5CUE domain-containing protein. (671 aa)    
Predicted Functional Partners:
A0A4Z1JVW6
Uncharacterized protein.
    
 0.984
A0A4Z1JQU2
zf-C2HC5 domain-containing protein.
    
 
 0.941
A0A4Z1KDL9
Uncharacterized protein.
    
 0.926
A0A4Z1K060
AKAP7_NLS domain-containing protein.
    
 0.892
A0A4Z1KB24
Uncharacterized protein.
    
 0.862
A0A4Z1JD61
RING-type domain-containing protein.
    
 
 0.588
A0A4Z1JSZ0
Uncharacterized protein.
   
  
 0.474
A0A4Z1ITV7
Uncharacterized protein.
      
 0.463
A0A4Z1JNK6
Uncharacterized protein.
      
 0.444
A0A4Z1JX87
Protein DOM34 homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs.
      
 0.408
Your Current Organism:
Botrytis elliptica
NCBI taxonomy Id: 278938
Other names: B. elliptica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.