STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Z1JHX2Uncharacterized protein. (630 aa)    
Predicted Functional Partners:
A0A4Z1JEA3
TPR_REGION domain-containing protein.
   
 0.946
A0A4Z1JIP5
Fip1 domain-containing protein.
    
 0.939
A0A4Z1JQ13
Uncharacterized protein.
   
 0.933
A0A4Z1JIX3
DUF3453 domain-containing protein.
   
 0.931
A0A4Z1JJ96
Cleavage and polyadenylation specificity factor subunit 2.
    
 0.924
A0A4Z1K4J7
CPSF_A domain-containing protein.
    
 0.922
A0A4Z1K283
YTH domain-containing protein.
    
 0.920
A0A4Z1JL60
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
    
 0.906
A0A4Z1JLN6
WD_REPEATS_REGION domain-containing protein.
    
 0.904
A0A4Z1K3R6
Uncharacterized protein.
    
 0.895
Your Current Organism:
Botrytis elliptica
NCBI taxonomy Id: 278938
Other names: B. elliptica
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