STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Z1JK75F-box domain-containing protein. (578 aa)    
Predicted Functional Partners:
A0A4Z1I4Y3
WD_REPEATS_REGION domain-containing protein.
  
 0.921
A0A4Z1K3G0
Uncharacterized protein.
   
 0.838
A0A4Z1JUI9
SCA7 domain-containing protein.
    
 0.811
A0A4Z1JEM3
TFIID_20kDa domain-containing protein.
    
 0.807
A0A4Z1KB29
Uncharacterized protein.
    
 0.807
A0A4Z1JDA6
Uncharacterized protein.
    
 0.806
A0A4Z1JGG7
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
 0.796
A0A4Z1JRJ2
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.796
A0A4Z1JU95
Hist_deacetyl domain-containing protein.
    
 0.796
A0A4Z1K3V9
TAF domain-containing protein.
    
 0.793
Your Current Organism:
Botrytis elliptica
NCBI taxonomy Id: 278938
Other names: B. elliptica
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