STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Z1JKW4Uncharacterized protein. (946 aa)    
Predicted Functional Partners:
A0A4Z1JL79
Endonuclease.
   
   0.942
A0A4Z1I9H8
BZIP domain-containing protein.
 
    
 0.899
A0A4Z1JTI9
Uncharacterized protein.
   
  
 0.793
A0A4Z1K3T1
WD_REPEATS_REGION domain-containing protein.
   
    0.733
A0A4Z1JY55
SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
  
 0.662
A0A4Z1JQC1
Uncharacterized protein.
  
  
 0.638
A0A4Z1JT10
Thiamine pyrophosphokinase; Belongs to the thiamine pyrophosphokinase family.
   
  0.621
A0A4Z1JX72
SpoU_sub_bind domain-containing protein.
  
 
 0.602
A0A4Z1JQA6
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
     
 0.598
A0A4Z1K6B3
WD_REPEATS_REGION domain-containing protein.
   
    0.597
Your Current Organism:
Botrytis elliptica
NCBI taxonomy Id: 278938
Other names: B. elliptica
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